Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RIMS4Regulating synaptic membrane exocytosis protein 4. (270 aa)    
Predicted Functional Partners:
PYURF
Protein preY, mitochondrial.
      
 0.735
LMNTD2
Lamin tail domain-containing protein 2.
   
  
 0.712
ENSPCIP00000007761
annotation not available
      
 0.618
PCYOX1
Prenylcysteine oxidase / farnesylcysteine lyase.
      
 0.546
UNC13B
Protein unc-13 homolog B isoform X1.
   
 0.530
ENSPCIP00000034165
annotation not available
   
 0.530
ENSPCIP00000005830
annotation not available
      
 0.529
UNC13C
Protein unc-13 homolog C isoform X1.
   
 0.528
ENSPCIP00000013391
annotation not available
     
 0.492
RSPH3
Radial spoke head protein 3 homolog isoform X1.
      
 0.490
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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