STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JPH2Junctophilin-2. (731 aa)    
Predicted Functional Partners:
RABGEF1
Rab5 GDP/GTP exchange factor isoform X1.
    
 0.521
RYR2
LOW QUALITY PROTEIN: ryanodine receptor 2.
   
 
 0.518
CAV3
Caveolin 3.
   
 
 0.495
CACNA1C
LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1C.
   
 
 0.488
CACNA1S
Calcium voltage-gated channel subunit alpha1 S.
   
 
 0.488
CACNA1D
Voltage-dependent L-type calcium channel subunit alpha-1D isoform X1.
   
 
 0.488
CACNA1F
Calcium voltage-gated channel subunit alpha1 F.
   
 
 0.478
ASB11
Ankyrin repeat and SOCS box protein 11 isoform X1.
   
 0.462
GDAP1
Ganglioside-induced differentiation-associated protein 1 isoform X1.
   
  
 0.450
MTM1
Myotubularin isoform X1.
      
 0.450
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.