Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZMYND8Protein kinase C-binding protein 1 isoform X1. (1184 aa)    
Predicted Functional Partners:
ZNF687
Zinc finger protein 687.
   
 
 0.967
ZNF592
Zinc finger protein 592 isoform X1.
   
 
 0.922
CHD4
LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 4.
    
 
 0.917
INTS3
Integrator complex subunit 3 isoform X1.
   
   0.915
INTS1
Integrator complex subunit 1 isoform X1.
    
   0.911
INTS5
Integrator complex subunit 5.
    
   0.911
INTS6
Integrator complex subunit 6 isoform X1.
    
   0.911
GATAD2A
GATA zinc finger domain containing 2A.
   
 
 0.905
MTA1
Metastasis associated 1.
    
 
 0.855
MTA3
Metastasis-associated protein MTA3.
    
 
 0.845
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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