STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUS3LTRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1. (688 aa)    
Predicted Functional Partners:
PUS1
TRNA pseudouridine synthase A, mitochondrial.
  
 
 0.808
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
  
 
 0.794
METTL1
TRNA (guanine-N(7)-)-methyltransferase.
  
 
 0.757
FTSJ3
AdoMet-dependent rRNA methyltransferase SPB1.
   
  
 0.746
BOP1
Ribosome biogenesis protein BOP1.
   
    0.743
CEP152
LOW QUALITY PROTEIN: centrosomal protein of 152 kDa.
   
    0.743
TRMT61A
TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit.
   
  
 0.740
NOP14
Nucleolar protein 14.
   
    0.730
ERI3
ERI1 exoribonuclease 3 isoform X1.
 
 
    0.729
WDR4
TRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 isoform X1.
   
 
 0.715
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.