STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO7F-box only protein 7. (518 aa)    
Predicted Functional Partners:
VPS35
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 35.
    
 
 0.661
ENSPCIP00000026212
annotation not available
    
 
 0.658
SKP1
S-phase kinase-associated protein 1.
    
 0.654
ENSPCIP00000039170
annotation not available
    
 0.654
ENSPCIP00000026820
annotation not available
    
 0.624
MRPL2
39S ribosomal protein L2, mitochondrial isoform X1.
    
 0.605
GBA
Glucosylceramidase isoform X1.
     
 0.582
ATXN2
Ataxin-2 isoform X1.
    
 
 0.571
RIC3
Protein RIC-3 isoform X1.
    
 
 0.571
VPS13C
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13C.
      
 0.570
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.