STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000011850annotation not available (219 aa)    
Predicted Functional Partners:
ENSPCIP00000046432
annotation not available
   
 0.842
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
 0.773
UBA6
Ubiquitin-like modifier-activating enzyme 6 isoform X1.
  
 0.588
TRAF7
TNF receptor associated factor 7.
   
 0.573
RANGAP1
LOW QUALITY PROTEIN: ran GTPase-activating protein 1.
   
 0.510
RAD18
E3 ubiquitin-protein ligase RAD18 isoform X1.
    
 0.504
ENSPCIP00000018193
RanBP2-like and GRIP domain-containing protein 3.
   
 0.499
ENSPCIP00000018195
E3 SUMO-protein ligase RanBP2-like.
   
 0.499
ENSPCIP00000052174
annotation not available
   
 0.499
UBE2H
Ubiquitin-conjugating enzyme E2 H.
   
 0.495
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.