Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB21Ras-related protein Rab-21. (229 aa)    
Predicted Functional Partners:
RABGEF1
Rab5 GDP/GTP exchange factor isoform X1.
    
 0.899
RAB22A
Ras-related protein Rab-22A.
   
 0.854
HGS
LOW QUALITY PROTEIN: hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 
 0.821
STAM
Signal transducing adapter molecule 1.
    
   0.814
ANKRD27
Ankyrin repeat domain-containing protein 27 isoform X1.
    
 0.738
DENND1B
LOW QUALITY PROTEIN: DENN domain-containing protein 1B.
      
 0.720
SBF1
Myotubularin-related protein 5/13.
    
 0.711
SBF2
LOW QUALITY PROTEIN: myotubularin-related protein 13.
    
 0.711
GAPVD1
LOW QUALITY PROTEIN: GTPase-activating protein and VPS9 domain-containing protein 1.
    
 0.672
ENSPCIP00000003143
annotation not available
     
 0.666
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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