Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAFA4Protein FAM19A4. (184 aa)    
Predicted Functional Partners:
TM7SF3
Transmembrane 7 superfamily member 3 isoform X1.
    
   0.556
CMTM8
CKLF-like MARVEL transmembrane domain-containing protein 8.
      
 0.471
MAL2
Mal, T cell differentiation protein 2 (gene/pseudogene).
      
 0.461
PHACTR3
LOW QUALITY PROTEIN: phosphatase and actin regulator 3.
      
 0.451
NXPH3
Neurexophilin-3.
  
   
 0.437
NXPH2
Neurexophilin-2.
  
  
 0.433
ALPK2
Alpha-protein kinase 2 isoform X1.
      
 0.427
GPLD1
LOW QUALITY PROTEIN: phosphatidylinositol-glycan-specific phospholipase D.
    
   0.415
AVL9
Late secretory pathway protein AVL9 homolog.
    
   0.415
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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