STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VRK3Inactive serine/threonine-protein kinase VRK3 isoform X1. (552 aa)    
Predicted Functional Partners:
DUSP3
Dual specificity protein phosphatase 3.
    
 0.847
LTV1
Protein LTV1 homolog.
    
 0.800
BYSL
Essential nuclear protein 1.
    
 0.712
RIOK2
Serine/threonine-protein kinase RIO2.
    
 0.707
SOST
Sclerostin.
    
 0.701
FAM83H
Protein FAM83H isoform X1.
    
 
 0.694
TSR1
Pre-rRNA-processing protein TSR1 homolog isoform X1.
    
 0.639
FAM83B
Protein FAM83B-like.
    
 
 0.600
NOB1
RNA-binding protein NOB1 isoform X1.
    
 0.600
PER3
Period circadian protein homolog 3.
    
 0.514
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.