Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VRK3Inactive serine/threonine-protein kinase VRK3 isoform X1. (552 aa)    
Predicted Functional Partners:
DUSP3
Dual specificity protein phosphatase 3.
    
 0.983
SOST
Sclerostin.
    
 0.887
FAM83H
Protein FAM83H isoform X1.
    
 
 0.810
MAPK7
Mitogen-activated protein kinase 7 isoform X1.
    
 0.683
LTV1
Protein LTV1 homolog.
    
 0.680
RIOK2
Serine/threonine-protein kinase RIO2.
   
 0.678
BYSL
Essential nuclear protein 1.
    
 0.669
TSR1
Pre-rRNA-processing protein TSR1 homolog isoform X1.
    
 0.666
FAM83B
Protein FAM83B-like.
    
 
 0.658
NOB1
RNA-binding protein NOB1 isoform X1.
    
 0.637
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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