MCAT protein (Phascolarctos cinereus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MCAT

Malonyl-CoA-acyl carrier protein transacylase, mitochondrial. (464 aa)

Predicted Functional Partners:

OXSM

0.991

ACACB

0.949

FASN

0.949

ACACA

0.949

ACSF3

0.921

NDUFAB1

0.902

ENSPCIP00000025227

0.902

ENSPCIP00000050650

0.902

MRPS16

0.878

ENSPCIP00000042648

0.876

Your Current Organism:

Phascolarctos cinereus

NCBI taxonomy Id: 38626
Other names: P. cinereus, koala

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACACA	ACACB	ENSPCIP00000051006	ENSPCIP00000024526	Acetyl-CoA carboxylase / biotin carboxylase 1.	Acetyl-CoA carboxylase / biotin carboxylase 2.	0.900
ACACA	ACSF3	ENSPCIP00000051006	ENSPCIP00000052439	Acetyl-CoA carboxylase / biotin carboxylase 1.	Acyl-CoA synthetase family member 3, mitochondrial isoform X1.	0.923
ACACA	ENSPCIP00000042648	ENSPCIP00000051006	ENSPCIP00000042648	Acetyl-CoA carboxylase / biotin carboxylase 1.	annotation not available	0.488
ACACA	FASN	ENSPCIP00000051006	ENSPCIP00000032183	Acetyl-CoA carboxylase / biotin carboxylase 1.	Fatty acid synthase, animal type.	0.970
ACACA	MCAT	ENSPCIP00000051006	ENSPCIP00000012140	Acetyl-CoA carboxylase / biotin carboxylase 1.	Malonyl-CoA-acyl carrier protein transacylase, mitochondrial.	0.949
ACACA	OXSM	ENSPCIP00000051006	ENSPCIP00000013975	Acetyl-CoA carboxylase / biotin carboxylase 1.	LOW QUALITY PROTEIN: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial.	0.488
ACACB	ACACA	ENSPCIP00000024526	ENSPCIP00000051006	Acetyl-CoA carboxylase / biotin carboxylase 2.	Acetyl-CoA carboxylase / biotin carboxylase 1.	0.900
ACACB	ACSF3	ENSPCIP00000024526	ENSPCIP00000052439	Acetyl-CoA carboxylase / biotin carboxylase 2.	Acyl-CoA synthetase family member 3, mitochondrial isoform X1.	0.923
ACACB	ENSPCIP00000042648	ENSPCIP00000024526	ENSPCIP00000042648	Acetyl-CoA carboxylase / biotin carboxylase 2.	annotation not available	0.488
ACACB	FASN	ENSPCIP00000024526	ENSPCIP00000032183	Acetyl-CoA carboxylase / biotin carboxylase 2.	Fatty acid synthase, animal type.	0.953
ACACB	MCAT	ENSPCIP00000024526	ENSPCIP00000012140	Acetyl-CoA carboxylase / biotin carboxylase 2.	Malonyl-CoA-acyl carrier protein transacylase, mitochondrial.	0.949
ACACB	OXSM	ENSPCIP00000024526	ENSPCIP00000013975	Acetyl-CoA carboxylase / biotin carboxylase 2.	LOW QUALITY PROTEIN: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial.	0.488
ACSF3	ACACA	ENSPCIP00000052439	ENSPCIP00000051006	Acyl-CoA synthetase family member 3, mitochondrial isoform X1.	Acetyl-CoA carboxylase / biotin carboxylase 1.	0.923
ACSF3	ACACB	ENSPCIP00000052439	ENSPCIP00000024526	Acyl-CoA synthetase family member 3, mitochondrial isoform X1.	Acetyl-CoA carboxylase / biotin carboxylase 2.	0.923
ACSF3	ENSPCIP00000025227	ENSPCIP00000052439	ENSPCIP00000025227	Acyl-CoA synthetase family member 3, mitochondrial isoform X1.	annotation not available	0.404
ACSF3	ENSPCIP00000050650	ENSPCIP00000052439	ENSPCIP00000050650	Acyl-CoA synthetase family member 3, mitochondrial isoform X1.	annotation not available	0.404
ACSF3	FASN	ENSPCIP00000052439	ENSPCIP00000032183	Acyl-CoA synthetase family member 3, mitochondrial isoform X1.	Fatty acid synthase, animal type.	0.956
ACSF3	MCAT	ENSPCIP00000052439	ENSPCIP00000012140	Acyl-CoA synthetase family member 3, mitochondrial isoform X1.	Malonyl-CoA-acyl carrier protein transacylase, mitochondrial.	0.921
ACSF3	NDUFAB1	ENSPCIP00000052439	ENSPCIP00000015596	Acyl-CoA synthetase family member 3, mitochondrial isoform X1.	NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein.	0.404
ENSPCIP00000025227	ACSF3	ENSPCIP00000025227	ENSPCIP00000052439	annotation not available	Acyl-CoA synthetase family member 3, mitochondrial isoform X1.	0.404