STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTLL12Tubulin--tyrosine ligase-like protein 12. (628 aa)    
Predicted Functional Partners:
EEF1AKMT1
Protein-lysine N-methyltransferase N6AMT2.
    
   0.844
DNAJB4
DnaJ homolog subfamily B member 4 isoform X1.
    
 
 0.819
PBDC1
Protein PBDC1.
    
   0.816
ENSPCIP00000031248
annotation not available
    
   0.816
TTLL1
Probable tubulin polyglutamylase TTLL1 isoform X1.
      
 0.719
DNAJB13
DnaJ homolog subfamily B member 13.
    
 
 0.703
DNAJB1
DnaJ homolog subfamily B member 1 isoform X1.
    
 
 0.703
TTLL9
Tubulin tyrosine ligase like 9.
    
 
 0.638
TTLL8
Protein monoglycylase TTLL8 isoform X1.
      
 0.618
TRIP6
LOW QUALITY PROTEIN: thyroid receptor-interacting protein 6.
   
   0.597
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.