STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000012176annotation not available (202 aa)    
Predicted Functional Partners:
PRPF6
Pre-mRNA-processing factor 6.
    
 
 0.883
SNRPA1
U2 small nuclear ribonucleoprotein A.
     
 0.776
DDX46
LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX46.
   
 
 0.745
PHF5A
PHD finger-like domain-containing protein 5A.
     
 0.734
SF3A2
Splicing factor 3A subunit 2.
    
  0.705
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.685
U2SURP
U2 snRNP-associated SURP motif-containing protein isoform X1.
    
  0.677
DHX15
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43.
   
 
  0.659
CHERP
Calcium homeostasis endoplasmic reticulum protein isoform X1.
   
 
  0.653
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
    
 0.603
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.