close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMA1LIM domain and actin-binding protein 1. (766 aa)    
Predicted Functional Partners:
EXOG
Nuclease EXOG, mitochondrial.
      
 0.654
MYO7B
Unconventional myosin-VIIb isoform X1.
   
  
 0.646
SULT1C2
Sulfotransferase 1C2-like.
      
 0.639
ATP1A4
Sodium/potassium-transporting ATPase subunit alpha-2-like isoform X1.
   
  
 0.636
CTNNB1
LOW QUALITY PROTEIN: catenin beta-1.
      
 0.573
ATP1A1
Sodium/potassium-transporting ATPase subunit alpha-1.
   
  
 0.434
ATP1A3
LOW QUALITY PROTEIN: sodium/potassium-transporting ATPase subunit alpha-3.
   
  
 0.434
ATP1A2
Sodium/potassium-transporting ATPase subunit alpha-2.
   
  
 0.434
TMLHE
Trimethyllysine dioxygenase, mitochondrial.
      
 0.407
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.