Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABLIM1Actin binding LIM protein 1. (830 aa)    
Predicted Functional Partners:
ABLIM2
Actin-binding LIM protein 2 isoform X1.
    
0.929
RAC2
Ras-related C3 botulinum toxin substrate 2.
     
 0.915
RAC3
Ras-related C3 botulinum toxin substrate 3 isoform X1.
     
 0.915
CDC42
Cell division control protein 42 homolog isoform X1.
     
 0.909
ENSPCIP00000047498
annotation not available
  
  
 
0.902
DLG4
Disks large homolog 4 isoform X1.
    
 
 0.820
SYNGAP1
LOW QUALITY PROTEIN: ras/Rap GTPase-activating protein SynGAP.
    
   0.736
ADD3
Gamma-adducin isoform X1.
   
 0.721
ADD1
Alpha-adducin isoform X1.
   
 0.712
ADD2
Beta-adducin isoform X1.
   
 0.712
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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