STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLIM1Actin binding LIM protein 1. (830 aa)    
Predicted Functional Partners:
SMPD4
Sphingomyelin phosphodiesterase 4 isoform X1.
      
 0.564
CLPTM1L
Cleft lip and palate transmembrane protein 1-like protein.
      
 0.557
NCLN
Nicalin isoform X1.
      
 0.554
ABRA
LOW QUALITY PROTEIN: actin-binding Rho-activating protein.
    
 
 0.536
HACD3
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 isoform X1.
      
 0.526
CELF1
CUGBP Elav-like family member 1 isoform X1.
      
 0.514
ADD3
Gamma-adducin isoform X1.
   
 0.474
ADD1
Alpha-adducin isoform X1.
   
 0.474
ADD2
Beta-adducin isoform X1.
   
 0.474
CLCN1
Chloride channel 1, skeletal muscle.
      
 0.440
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.