STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VWA2Von Willebrand factor A domain-containing protein 2 isoform X1. (784 aa)    
Predicted Functional Partners:
COL6A1
Collagen alpha-1(VI) chain.
   
 0.967
COL6A2
Collagen alpha-2(VI) chain isoform X1.
   
 0.895
COL1A2
Collagen alpha-2(I) chain.
   
 
  0.832
COL3A1
Collagen alpha-1(III) chain isoform X1.
   
 
 0.762
COL1A1
Collagen alpha-1(I) chain.
   
 
 0.751
LUM
Lumican.
   
 0.584
LAMA2
Laminin subunit alpha-2 isoform X1.
   
 0.553
DCN
Decorin.
   
 0.533
ENSPCIP00000043315
Interleukin-2-like.
   
  
 0.492
COL5A2
LOW QUALITY PROTEIN: collagen alpha-2(V) chain.
   
 
 0.485
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.