Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KLK13LOW QUALITY PROTEIN: kallikrein-13. (119 aa)    
Predicted Functional Partners:
ENSPCIP00000011576
annotation not available
 
     0.786
CTRL
Chymotrypsin like.
  
  0.747
CFD
Complement factor D.
  
  
 0.694
CELA1
Chymotrypsin-like elastase family member 1.
  
 
 0.633
PRSS50
Probable threonine protease PRSS50 isoform X1.
  
 
  0.578
ENSPCIP00000052541
Acrosin-like.
  
  
 0.578
ENSPCIP00000052558
Tryptase-like.
  
  
  0.575
ENSPCIP00000000240
LOW QUALITY PROTEIN: uncharacterized protein LOC110194016.
  
  
  0.574
ENSPCIP00000043505
annotation not available
  
  
  0.574
ENSPCIP00000045387
Chymotrypsinogen A-like.
  
0.550
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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