Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WASHC3WASH complex subunit 3 isoform X1. (199 aa)    
Predicted Functional Partners:
WASHC5
WASH complex subunit strumpellin.
    
 0.958
WASHC4
WASH complex subunit 4.
    
 0.954
WASHC1
WASH complex subunit 1 isoform X1.
    
 0.945
WASHC2C
WASH complex subunit 2C isoform X1.
    
 0.931
BLOC1S4
Biogenesis of lysosome-related organelles complex 1 subunit 4.
    
   0.810
RCSD1
CapZ-interacting protein isoform X1.
    
 0.805
NUP37
Nuclear pore complex protein Nup37.
 
 
 
 0.792
ENSPCIP00000008089
annotation not available
    
 
 0.738
ENSPCIP00000032546
annotation not available
    
 
 0.738
HSBP1
LOW QUALITY PROTEIN: heat shock factor-binding protein 1.
    
 
 0.738
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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