Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUP37Nuclear pore complex protein Nup37. (317 aa)    
Predicted Functional Partners:
NUP85
Nuclear pore complex protein Nup85 isoform X1.
   
 0.999
NUP107
Nuclear pore complex protein Nup107.
   
 0.999
NUP43
Nuclear pore complex protein Nup43.
   
 0.999
NUP133
Nuclear pore complex protein Nup133.
   
 0.998
SEC13
Protein SEC13 homolog isoform X1.
   
 0.994
NUP98
LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96.
    
 0.993
SEH1L
Nucleoporin SEH1 isoform X1.
   
 0.993
NUP160
LOW QUALITY PROTEIN: nuclear pore complex protein Nup160.
   
 0.982
ENSPCIP00000046094
annotation not available
   
 0.977
ENSPCIP00000016945
Nuclear pore complex protein Nup160-like.
   
 0.974
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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