STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBBP7Histone-binding protein RBBP7. (425 aa)    
Predicted Functional Partners:
EED
Embryonic ectoderm development.
   
 0.970
SUZ12
Polycomb protein SUZ12.
   
 0.969
EZH1
[histone H3]-lysine27 N-trimethyltransferase EZH1.
    
 0.947
AEBP2
LOW QUALITY PROTEIN: zinc finger protein AEBP2.
    
 0.935
MTA2
Metastasis-associated protein MTA2.
   
 0.933
EZH2
Histone-lysine N-methyltransferase EZH2 isoform X1.
    
 0.932
HAT1
Histone acetyltransferase type B catalytic subunit.
   
 0.931
LIN9
Protein lin-9 homolog isoform X1.
    
 0.926
MTA1
Metastasis associated 1.
   
 0.915
GATAD2B
Transcriptional repressor p66-beta isoform X1.
   
 0.915
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.