STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000012410annotation not available (99 aa)    
Predicted Functional Partners:
RUFY1
RUN and FYVE domain-containing protein 1 isoform X1.
    
 
 0.816
RUFY3
Protein RUFY3 isoform X1.
   
   0.769
DNA2
LOW QUALITY PROTEIN: DNA replication ATP-dependent helicase/nuclease DNA2.
 
    
 0.605
RUFY4
RUN and FYVE domain-containing protein 4.
    
 
 0.504
RAB33A
Ras-related protein Rab-33A.
    
 
 0.495
EEA1
LOW QUALITY PROTEIN: early endosome antigen 1.
    
 
 0.447
UVRAG
UV radiation resistance-associated gene protein.
    
 
 0.434
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.