STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD21L1LOW QUALITY PROTEIN: double-strand-break repair protein rad21-like protein 1. (69 aa)    
Predicted Functional Partners:
SMC1A
Structural maintenance of chromosomes protein 1A.
   
 0.988
SMC3
Structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6).
   
 0.984
STAG2
Cohesin subunit SA-2 isoform X1.
   
 0.984
SMC1B
Structural maintenance of chromosomes 1B.
   
 0.976
STAG3
Cohesin subunit SA-3 isoform X1.
   
 0.965
STAG1
Cohesin complex subunit SA-1/2.
   
 0.950
PDS5A
LOW QUALITY PROTEIN: sister chromatid cohesion protein PDS5 homolog A.
   
 0.940
NIPBL
LOW QUALITY PROTEIN: nipped-B-like protein.
   
 0.930
WAPL
Wings apart-like protein homolog isoform X1.
    
 0.929
PDS5B
LOW QUALITY PROTEIN: sister chromatid cohesion protein PDS5 homolog B.
   
 0.915
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.