STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDCBP2Syntenin-2 isoform X1. (305 aa)    
Predicted Functional Partners:
CD63
CD63 antigen.
   
 0.809
PDCD6IP
Programmed cell death 6-interacting protein.
    
 0.743
NFASC
Neurofascin.
     
 0.623
SDC1
Syndecan-1 isoform X1.
    
 
 0.589
CASK
Calcium/calmodulin-dependent serine protein kinase.
   
 0.578
TSG101
Tumor susceptibility gene 101 protein isoform X1.
   
  
 0.567
CD81
CD81 antigen.
    
 0.540
IFT57
Intraflagellar transport protein 57 homolog.
    
 0.533
FARP1
FERM, RhoGEF and pleckstrin domain-containing protein 1.
    
 
 0.528
IFT172
Intraflagellar transport protein 172 homolog isoform X1.
    
 0.527
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.