STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEPDC7DEP domain-containing protein 7. (520 aa)    
Predicted Functional Partners:
TCP11L1
T-complex protein 11-like protein 1.
 
    
 0.689
ATP8B4
Probable phospholipid-transporting ATPase IM isoform X1.
      
 0.582
FLRT3
LOW QUALITY PROTEIN: leucine-rich repeat transmembrane protein FLRT3.
      
 0.562
RASL10B
Ras-like protein family member 10B.
      
 0.558
RASL11B
Ras-like protein family member 11B.
      
 0.504
KRT23
Keratin, type I cytoskeletal 23 isoform X1.
      
 0.501
TMEM47
Transmembrane protein 47.
      
 0.480
ABTB2
Ankyrin repeat and BTB/POZ domain-containing protein 2.
      
 0.471
SLC5A2
Solute carrier family 5 member 2.
      
 0.461
ACTR6
Actin-related protein 6 isoform X1.
   
  
 0.458
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.