STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000012547Putative RNA-binding protein Luc7-like 2 isoform X1. (287 aa)    
Predicted Functional Partners:
RBM25
RNA-binding protein 25 isoform X1.
   
 0.937
SNRPC
U1 small nuclear ribonucleoprotein C isoform X1.
    
 
 0.852
SNRPA1
U2 small nuclear ribonucleoprotein A.
   
 0.849
SART1
LOW QUALITY PROTEIN: U4/U6.U5 tri-snRNP-associated protein 1.
    
 0.825
SNRPD1
Small nuclear ribonucleoprotein Sm D1 isoform X1.
    
 
 0.823
SF3B3
Splicing factor 3B subunit 3.
    
 0.806
PRPF39
Pre-mRNA-processing factor 39 isoform X1.
   
 
 0.775
PRPF40B
Pre-mRNA-processing factor 40 homolog B isoform X1.
   
 
 0.770
NCBP1
Nuclear cap-binding protein subunit 1.
    
 
 0.755
SNRNP70
U1 small nuclear ribonucleoprotein 70 kDa isoform X1.
   
 
 0.748
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (20%) [HD]