Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITLN1LOW QUALITY PROTEIN: intelectin-1-like. (299 aa)    
Predicted Functional Partners:
LYZ
Lysozyme C.
      
 0.756
ATG16L1
Autophagy-related protein 16-1 isoform X1.
    
 
 0.699
EXOG
Nuclease EXOG, mitochondrial.
   
   0.594
ENDOG
Endonuclease G, mitochondrial.
   
   0.594
NOD2
Nucleotide-binding oligomerization domain-containing protein 2.
      
 0.566
ENSPCIP00000021357
Lysozyme C-like.
      
 0.547
ENSPCIP00000002337
Regenerating islet-derived protein 4.
   
  
 0.543
ENSPCIP00000005076
Lithostathine-1-beta-like isoform X1.
   
  
 0.543
ENSPCIP00000052955
Lithostathine-like.
   
  
 0.543
DCPS
M7GpppX diphosphatase isoform X1.
   
  
 0.541
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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