Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EMDEmerin. (275 aa)    
Predicted Functional Partners:
BANF1
Barrier-to-autointegration factor.
    
 0.989
LMNA
Lamin A/C.
    
 0.986
ENSPCIP00000036843
annotation not available
    
 0.954
BANF2
Barrier-to-autointegration factor-like protein isoform X1.
    
 0.869
LMNB1
Lamin-B1.
    
 0.851
LMNB2
Lamin-B2.
    
 0.851
LEMD3
LEM domain containing 3.
     
 0.843
SYNE2
Spectrin repeat containing nuclear envelope protein 2.
    
 
 0.830
FAF2
FAS-associated factor 2 isoform X1.
    
   0.813
LBR
Delta14-sterol reductase (lamin-B receptor).
     
 0.789
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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