STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHST12Chondroitin 4-sulfotransferase 12. (419 aa)    
Predicted Functional Partners:
CHST11
Carbohydrate sulfotransferase 11 isoform X1.
     
0.901
CHST13
Carbohydrate sulfotransferase 13.
     
0.901
CHST7
Chondroitin 6-sulfotransferase 7.
   
  
 0.757
CSGALNACT2
Chondroitin sulfate N-acetylgalactosaminyltransferase 1/2.
      
 0.755
GP1BA
Platelet glycoprotein Ib alpha chain.
    
 0.648
NDST2
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 isoform X1.
      
 0.626
CSGALNACT1
Chondroitin sulfate N-acetylgalactosaminyltransferase 1/2.
      
 0.605
EXTL2
Alpha-1,4-N-acetylglucosaminyltransferase EXTL2.
      
 0.576
CHST15
N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase.
      
 0.550
ST8SIA5
Alpha-N-acetyl-neuraminate alpha-2,8-sialyltransferase (sialyltransferase 8E).
   
  
 0.549
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.