Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GRIFINGrifin isoform X1. (148 aa)    
Predicted Functional Partners:
LYRM9
LYR motif-containing protein 9 isoform X1.
      
 0.775
WSB1
WD repeat and SOCS box-containing protein 1.
      
 0.679
KSR1
Kinase suppressor of ras 1.
   
 
 0.673
CRYBA4
Beta-crystallin A4.
   
  
 0.650
LGALS1
Galectin-1.
  
   
 0.632
PLEKHG3
Pleckstrin homology domain-containing family G member 3 isoform X1.
      
 0.626
RNF10
LOW QUALITY PROTEIN: RING finger protein 10.
      
 0.593
LGALS2
Galectin-2-like isoform X1.
  
   
 0.584
CRYGN
Gamma-crystallin N isoform X1.
   
 0.570
PLEKHH3
Pleckstrin homology domain-containing family H member 3 isoform X1.
      
 0.555
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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