Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSPCIP00000012689Tubulin alpha-8 chain isoform X1. (490 aa)    
Predicted Functional Partners:
MAPT
Microtubule-associated protein tau isoform X1.
    
 0.941
CDC42
Cell division control protein 42 homolog isoform X1.
   
 0.925
ENSPCIP00000043865
LOW QUALITY PROTEIN: granzyme B(G,H)-like.
    
  0.908
TJP1
Tight junction protein ZO-1 isoform X1.
    
 0.906
GJA1
Gap junction alpha-1 protein.
     
  0.900
MARVELD2
MARVEL domain containing 2.
     
  0.900
TUBB1
Tubulin beta-1 chain.
  
0.895
TUBB2B
Tubulin beta-2B chain isoform X1.
  
0.895
TUBB4B
Tubulin beta-4B chain.
  
0.895
TUBB
LOW QUALITY PROTEIN: tubulin beta chain.
  
0.895
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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