STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LGI4LOW QUALITY PROTEIN: leucine-rich repeat LGI family member 4. (539 aa)    
Predicted Functional Partners:
ADAM11
Disintegrin and metalloproteinase domain-containing protein 11 isoform X1.
     
 0.765
ADAM22
Disintegrin and metalloproteinase domain-containing protein 22.
     
 0.764
ADAM23
Disintegrin and metalloproteinase domain-containing protein 23 isoform X1.
     
 0.659
PRAG1
Tyrosine-protein kinase SgK223.
      
 0.581
METRN
Meteorin.
   
  
 0.577
MPZ
Myelin protein zero.
      
 0.551
GPSM1
G-protein-signaling modulator 1 isoform X1.
      
 0.549
SEMA4F
Semaphorin-4F isoform X1.
      
 0.548
PPP2R5B
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform.
      
 0.547
PRKCG
LOW QUALITY PROTEIN: protein kinase C gamma type.
      
 0.546
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.