Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DESDesmin. (504 aa)    
Predicted Functional Partners:
SYNC
Syncoilin isoform X1.
   
 
 0.881
GAN
Kelch-like protein 16 (gigaxonin).
    
 
 0.868
NEFL
Neurofilament light polypeptide.
   
 
 0.863
INA
Internexin neuronal intermediate filament protein, alpha.
   
 
 0.860
ENSPCIP00000019710
annotation not available
   
  0.852
PRPH
Peripherin.
   
   0.850
NES
Nestin isoform X1.
    
 
 0.833
KRT18
Keratin, type I cytoskeletal 18.
    
 
 0.822
KRT8
Keratin, type II cytoskeletal 8.
   
 
 0.820
KRT7
Keratin, type II cytoskeletal 7.
    
 
 0.816
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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