STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRMT6Type I protein arginine methyltransferase. (379 aa)    
Predicted Functional Partners:
NTMT1
N-terminal Xaa-Pro-Lys N-methyltransferase 1 isoform X1.
   
 
 0.804
HDAC2
Histone deacetylase 1/2.
   
 0.738
HDAC1
Histone deacetylase 1/2.
   
 0.738
PRMT5
Type II protein arginine methyltransferase.
   
 0.734
FBL
RRNA 2'-O-methyltransferase fibrillarin.
   
 
 0.724
UBP1
Transcription factor CP2 and related proteins.
   
  0.697
HDAC8
Histone deacetylase 8.
   
 0.683
TSR2
Pre-rRNA-processing protein TSR2 homolog isoform X1.
   
 
 0.682
ENSPCIP00000046106
annotation not available
 
 
 0.667
CBFB
Core-binding factor subunit beta isoform X1.
     
  0.635
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.