Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DCPSM7GpppX diphosphatase isoform X1. (339 aa)    
Predicted Functional Partners:
SUOX
Sulfite oxidase, mitochondrial.
    
   0.801
NDOR1
LOW QUALITY PROTEIN: NADPH-dependent diflavin oxidoreductase 1.
      
 0.752
ENSPCIP00000026614
annotation not available
   
   0.697
FZR1
Cell division cycle 20-like protein 1, cofactor of APC complex.
   
   0.697
XRN1
5'-3' exoribonuclease 1 isoform X1.
    
 
 0.652
TREH
Alpha,alpha-trehalase.
   
 
 0.636
TSEN2
TRNA-splicing endonuclease subunit Sen2.
      
 0.626
CCNH
Cyclin H.
    
 
 0.622
ENSPCIP00000010000
annotation not available
   
   0.590
DCP1B
MRNA-decapping enzyme 1B isoform X1.
      
 0.551
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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