Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDH10Cadherin 10, type 2, T2-cadherin. (788 aa)    
Predicted Functional Partners:
CDH9
Cadherin 9, type 2, T1-cadherin.
  
 
 
0.744
CDH7
Cadherin 7, type 2.
  
 
0.736
CDH18
Cadherin-18.
  
0.735
CDH13
Cadherin 13, H-cadherin.
     
0.734
CDH8
Cadherin 8, type 2.
   
 
0.734
ENSPCIP00000049516
Cadherin-18-like.
   
0.732
CDH17
LOW QUALITY PROTEIN: cadherin-17.
     
0.725
CTNNA1
Catenin alpha-1.
   
 0.710
CDH11
Cadherin 11, type 2, OB-cadherin.
  
 
0.710
CDH24
Cadherin-24 isoform X1.
  
  
 
0.706
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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