STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HYLS1HYLS1 centriolar and ciliogenesis associated. (307 aa)    
Predicted Functional Partners:
POC1B
POC1 centriolar protein homolog B isoform X1.
      
 0.755
DDX25
ATP-dependent RNA helicase DDX25 isoform X1.
      
 0.720
POC1A
POC1 centriolar protein homolog A isoform X1.
      
 0.637
PKNOX2
Homeobox protein PKNOX2 isoform X1.
      
 0.634
XKR8
LOW QUALITY PROTEIN: XK-related protein 8.
      
 0.622
TEX43
Testis-expressed protein 43.
      
 0.554
TEKT5
Tektin-5.
      
 0.551
ODF3
Outer dense fiber protein 3.
      
 0.549
B9D1
B9 domain-containing protein 1.
      
 0.546
TPPP2
Tubulin polymerization-promoting protein family member 2.
      
 0.512
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.