STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000012880Small subunit ribosomal protein S4e. (263 aa)    
Predicted Functional Partners:
RPS7
LOW QUALITY PROTEIN: 40S ribosomal protein S7.
   
 0.997
RPS20
LOW QUALITY PROTEIN: 40S ribosomal protein S20.
   
 0.993
RPS17
Small subunit ribosomal protein S17e.
   
 0.989
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.989
RPS16
Small subunit ribosomal protein S16e.
   
 0.988
RPL6
Large subunit ribosomal protein L6e.
  
 
 0.980
RPL4
Large subunit ribosomal protein L4e.
   
 0.978
RPS11
Small subunit ribosomal protein S11e.
  
 0.978
RPS28
Small subunit ribosomal protein S28e.
   
 0.978
RPS18
Small subunit ribosomal protein S18e.
  
 0.978
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.