Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
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Co-expression
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[Homology]
Score
PNPT1Polyribonucleotide nucleotidyltransferase 1, mitochondrial. (785 aa)    
Predicted Functional Partners:
SUPV3L1
ATP-dependent RNA helicase SUPV3L1, mitochondrial.
   
 0.991
SEMA6B
Semaphorin-6B.
   
    0.963
PMPCB
Peptidase, mitochondrial processing beta subunit.
  
 
 0.870
PMPCA
Mitochondrial-processing peptidase subunit alpha isoform X1.
  
 
 0.843
EXOSC10
Exosome complex exonuclease RRP6.
   
 
 0.831
ENSPCIP00000012915
Retinal dehydrogenase 1-like.
   
  
 0.816
TSFM
LOW QUALITY PROTEIN: elongation factor Ts, mitochondrial.
  
 
 0.799
DIS3
Exosome complex exonuclease DIS3/RRP44.
   
 
 0.782
CHEK2
Serine/threonine-protein kinase Chk2 isoform X1.
      
 0.779
MRPL20
39S ribosomal protein L20, mitochondrial.
  
  
 0.765
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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