Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSPCIP00000012915Retinal dehydrogenase 1-like. (495 aa)    
Predicted Functional Partners:
ALDH1A3
Aldehyde dehydrogenase family 1 member A3.
  
 
 
0.970
ALDH1A2
Retinal dehydrogenase 2.
  
 
 
0.963
CYP26A1
Cytochrome P450 family 26 subfamily A.
   
 0.946
CYP26B1
Cytochrome P450 family 26 subfamily B.
   
 0.943
AOX1
Aldehyde oxidase.
   
 
 0.935
ENSPCIP00000040312
Aldehyde oxidase 2-like isoform X1.
   
 
 0.935
ENSPCIP00000047095
Aldehyde oxidase 3-like isoform X1.
   
 
 0.935
DHRS3
Short-chain dehydrogenase/reductase 3 isoform X1.
   
 0.932
ENSPCIP00000003976
Alcohol dehydrogenase class 4 mu/sigma chain-like.
  
 0.931
ENSPCIP00000010418
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
 0.931
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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