STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD3Sterile alpha motif domain-containing protein 3 isoform X1. (520 aa)    
Predicted Functional Partners:
HSPD1
60 kDa heat shock protein, mitochondrial.
    
   0.588
RNF157
RING finger protein 157 isoform X1.
      
 0.556
UNC45B
Protein unc-45 homolog B.
    
 
 0.514
DNAAF4
Dyslexia susceptibility 1 candidate gene 1 protein isoform X1.
      
 0.507
CCDC77
Coiled-coil domain-containing protein 77.
    
 
 0.428
LRRC49
Leucine-rich repeat-containing protein 49 isoform X1.
    
 
 0.427
EOMES
Eomesodermin homolog isoform X1.
   
  
 0.426
GPR108
G protein-coupled receptor 108.
      
 0.423
THAP10
THAP domain-containing protein 10.
      
 0.423
SAMD5
Sterile alpha motif domain containing 5.
      
 0.401
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.