Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RAB6BRas-related protein Rab-6B. (208 aa)    
Predicted Functional Partners:
RIC1
RAB6A-GEF complex partner protein 1 isoform X1.
   
 0.822
RGP1
RAB6A-GEF complex partner protein 2 isoform X1.
    
 0.775
COG6
Conserved oligomeric Golgi complex subunit 6.
   
 0.775
ARFRP1
ADP-ribosylation factor-related protein 1 isoform X1.
    
 0.759
VPS52
Vacuolar protein sorting-associated protein 52 homolog isoform X1.
    
 0.755
GCC2
GRIP and coiled-coil domain-containing protein 2 isoform X1.
    
 0.736
COG8
Conserved oligomeric Golgi complex subunit 8.
    
 0.734
BICD2
LOW QUALITY PROTEIN: protein bicaudal D homolog 2-like.
    
 0.730
BICD1
Protein bicaudal D homolog 1 isoform X1.
    
 0.724
VPS53
Vacuolar protein sorting-associated protein 53 homolog.
    
 0.723
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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