STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000013007annotation not available (269 aa)    
Predicted Functional Partners:
SRPRA
Signal recognition particle receptor subunit alpha.
   
 0.997
SRP68
Signal recognition particle subunit SRP68 isoform X1.
   
 
 0.961
SRP54
Signal recognition particle 54 kDa protein.
   
 
 0.961
SRP72
Signal recognition particle subunit SRP72.
    
 
 0.955
SRP19
Signal recognition particle 19 kDa protein.
   
 
 0.925
ATR
LOW QUALITY PROTEIN: serine/threonine-protein kinase ATR.
    
   0.876
ENSPCIP00000013011
Inhibitor of carbonic anhydrase-like.
 
    
 0.875
ENSPCIP00000009917
annotation not available
   
 
 0.853
RPL4
Large subunit ribosomal protein L4e.
    
 
 0.803
RPL5
60S ribosomal protein L5 isoform X1.
    
   0.787
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.