Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ANKRD55LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 55. (269 aa)    
Predicted Functional Partners:
IFT52
Intraflagellar transport protein 52 homolog isoform X1.
    
 0.877
IFT46
Intraflagellar transport protein 46 homolog isoform X1.
    
 0.873
TTC30B
Tetratricopeptide repeat protein 30B.
    
 0.858
IFT74
Intraflagellar transport protein 74 homolog isoform X1.
    
 
 0.852
FAM84A
Protein FAM84A.
      
 0.756
IL31RA
Interleukin-31 receptor subunit alpha isoform X1.
    
 0.734
VSTM5
V-set and transmembrane domain-containing protein 5.
      
 0.711
BRS3
Bombesin receptor subtype-3 isoform X1.
     
 0.706
CNGA3
Cyclic nucleotide-gated cation channel alpha-3 isoform X1.
    
 
 0.623
CCDC138
Coiled-coil domain containing 138.
    
 
 0.620
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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