Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NYNRINProtein NYNRIN. (1809 aa)    
Predicted Functional Partners:
LOXL1
Lysyl oxidase-like protein 1.
    
 0.862
RBBP7
Histone-binding protein RBBP7.
   
 0.846
RBBP4
Histone-binding protein RBBP4 isoform X1.
   
 0.846
ENSPCIP00000032456
annotation not available
   
 0.846
WDR73
WD repeat-containing protein 73.
   
 0.846
CBLN3
Cerebellin-3.
    
 0.787
STXBP6
Syntaxin-binding protein 6.
      
 0.760
PGBD1
PiggyBac transposable element-derived protein 1 isoform X1.
    
 0.711
SDR39U1
Epimerase family protein SDR39U1 isoform X1.
      
 0.706
HDAC8
Histone deacetylase 8.
   
 0.699
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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