STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FADS1Acyl-CoA (8-3)-desaturase (Delta-5 desaturase). (360 aa)    
Predicted Functional Partners:
SC5D
Delta7-sterol 5-desaturase.
  
 
 0.615
MSMO1
Methylsterol monooxygenase 1.
  
 
 0.569
FAXDC2
Fatty acid hydroxylase domain-containing protein 2 isoform X1.
  
 
 0.569
CH25H
Cholesterol 25-hydroxylase.
  
 
 0.569
FDX1
LOW QUALITY PROTEIN: adrenodoxin, mitochondrial.
  
 
 0.523
ENSPCIP00000027144
Ferredoxin-2, mitochondrial.
  
 
 0.523
ENSPCIP00000052096
annotation not available
  
 
 0.523
MAN2A1
Alpha-mannosidase II.
   
    0.439
KMO
Kynurenine 3-monooxygenase isoform X1.
   
 
 0.436
SQLE
Squalene monooxygenase isoform X1.
   
 
 0.436
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.