STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH2LG patch domain-containing protein 2-like isoform X1. (529 aa)    
Predicted Functional Partners:
DHX15
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43.
    
 0.941
DDX10
Probable ATP-dependent RNA helicase DDX10.
    
 0.890
PINX1
PIN2/TERF1-interacting telomerase inhibitor 1.
    
 
 0.883
DDX18
ATP-dependent RNA helicase DDX18/HAS1.
    
 0.880
BYSL
Essential nuclear protein 1.
    
 
 0.876
UTP6
U3 small nucleolar RNA-associated protein 6 homolog.
    
 
 0.872
NOM1
Nucleolar MIF4G domain-containing protein 1.
   
   0.867
KRR1
KRR1 small subunit processome component homolog.
   
   0.866
UTP25
U3 small nucleolar RNA-associated protein 25.
    
   0.866
NOP14
Nucleolar protein 14.
    
   0.866
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.