Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLB1Beta-galactosidase isoform X1. (653 aa)    
Predicted Functional Partners:
NEU1
Sialidase-1.
  
 0.999
NEU4
Sialidase-4 isoform X1.
   
 
 0.992
GLA
Alpha-galactosidase A isoform X1.
  
 
 0.971
GALNS
Adenine phosphoribosyltransferase.
    
 0.965
ARSA
Arylsulfatase A.
   
 0.945
HEXA
Beta-hexosaminidase subunit alpha isoform X1.
  
 
 0.940
GBA
Glucosylceramidase isoform X1.
  
 0.940
HEXB
Beta-hexosaminidase subunit beta.
  
 
 0.938
GNS
N-acetylglucosamine-6-sulfatase.
   
 0.936
CTSA
Lysosomal protective protein isoform X1.
   
 0.931
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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