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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRTAPCartilage-associated protein. (428 aa)    
Predicted Functional Partners:
P3H1
Procollagen-proline 3-dioxygenase 1.
   
0.808
PPIB
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B).
   
 0.797
COL5A2
LOW QUALITY PROTEIN: collagen alpha-2(V) chain.
    
 0.671
P3H3
Procollagen-proline 3-dioxygenase 3.
  
0.668
PPIC
Peptidyl-prolyl isomerase C (cyclophilin C).
   
 0.649
P3H2
Procollagen-proline 3-dioxygenase 2.
   
0.643
PLOD1
LOW QUALITY PROTEIN: procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 
 0.635
COL1A1
Collagen alpha-1(I) chain.
    
 0.610
ADAMTS2
LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 2.
      
 0.574
SERPINH1
Serpin peptidase inhibitor, clade H, member 1.
   
 
 0.555
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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