Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RHOBTB2LOW QUALITY PROTEIN: rho-related BTB domain-containing protein 2. (726 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.915
KEAP1
Kelch-like ECH-associated protein 1.
    
 0.905
ENSPCIP00000003307
Kelch-like protein 9/13.
    
  0.904
KLHL13
Kelch-like protein 13 isoform X1.
    
  0.904
RHOBTB1
Rho-related BTB domain-containing protein 1/2.
  
  
 
0.901
ITSN2
Intersectin-2.
    
 0.861
KALRN
LOW QUALITY PROTEIN: kalirin.
    
 0.815
GPS1
COP9 signalosome complex subunit 1 isoform X1.
    
  0.796
TRIO
Triple functional domain protein isoform X1.
    
 0.773
PDE5A
Phosphodiesterase 5A.
    
 0.757
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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