STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFP36MRNA decay activator protein ZFP36. (374 aa)    
Predicted Functional Partners:
MAPKAPK2
Mitogen-activated protein kinase-activated protein kinase 2.
    
 0.973
EXOSC8
Exosome complex component RRP43.
   
  0.785
XRN1
5'-3' exoribonuclease 1 isoform X1.
    
 0.779
DCP2
M7GpppN-mRNA hydrolase isoform X1.
   
 0.717
CNOT1
CCR4-NOT transcription complex subunit 1 isoform X1.
    
 
 0.714
EXOSC2
Exosome complex component RRP4 isoform X1.
    
 0.585
EXOSC1
Exosome complex component CSL4 isoform X1.
     
 0.582
TNPO1
Transportin-1.
     
 0.528
MAPKAPK3
Mitogen-activated protein kinase-activated protein kinase 3.
    
 0.527
DCP1A
MRNA-decapping enzyme 1A.
    
 0.519
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.