Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAMD4BProtein Smaug homolog 2. (683 aa)    
Predicted Functional Partners:
NANOS1
Nanos homolog 1.
    
 
 0.785
CARHSP1
Calcium-regulated heat-stable protein 1.
    
 
 0.717
ENSPCIP00000022523
annotation not available
      
 0.637
TMEM63C
Calcium permeable stress-gated cation channel 1 isoform X1.
   
  
 0.631
ENSPCIP00000016199
annotation not available
      
 0.615
WDR5
WD repeat-containing protein 5.
    
 
 0.614
ENSPCIP00000018707
annotation not available
    
   0.588
YWHAE
14-3-3 protein epsilon isoform X1.
    
   0.588
GPRC5C
G protein-coupled receptor class C group 5 member C.
      
 0.507
ACO1
Cytoplasmic aconitate hydratase.
    
 
 0.496
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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